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Researchers find diatoms and bacteria are BFFs

By Leonard Ho - Posted May 28, 2015 09:00 AM
The ocean is a complex symphony of life. We are only beginning to understand the amazing interactions between different organisms, especially at the microscopic level. These "micro-interactions" can shape entire ecosystems. Such is the case with diatoms and bacteria.
Researchers find diatoms and bacteria are BFFs

Diatoms are single-celled algae that take many intricate shapes. The Pseudo-nitzschia multiseries used in the study are simple rods that carry out photosynthesis throughout the world’s oceans.California Academy of Sciences / Flickr

From the University of Washington:


Invisible helpers of the sea: Marine bacteria boost growth of tiny ocean algae

by Hannah Hickey

A glass of seawater is teeming with life, and a recent expedition revealed more about what ocean water contains. Microscopic creatures in the world’s oceans weigh more than all of the fish in the sea and produce about half of the Earth’s oxygen.

Yet the ecology of marine microbes, which are crucial for everything from absorbing carbon dioxide from the air to regulating the productivity of major fisheries, are only beginning to be understood.

In a step to understanding this hidden world, University of Washington oceanographers have found that diatoms — the intricately patterned single-celled algae that exist throughout the world’s oceans — grow faster in the presence of bacteria that release a growth hormone known to benefit land plants. The study, published online May 27 in Nature, uses genetic and molecular tools to discover what controls marine ecosystems.

“These very small organisms are interacting with their environment, but they’re also interacting with other organisms,” said co-author Ginger Armbrust, a UW professor of oceanography. “In my mind, in order to understand how future ecosystems will work, we need to understand how these organisms that are the basis of the marine food web interact with one another.”

Armbrust co-authored the companion commentary to the recent special section of Science on the Tara Oceans expedition, describing the work as “a vivid, potentially transformative view of the genetic diversity and interconnectivity of these unseen marine communities.”

Armbrust’s research group has long studied diatoms, which are microscopic algae that carry out one fifth of the planet’s photosynthesis, more than all the terrestrial rainforests combined. Lab members began this project by looking at which bacteria were found in all samples of Pseudo-nitzschia multiseries, a common coastal diatom collected from five places throughout the northern Pacific and Atlantic Oceans. Next they cured the water samples of all bacteria living in the seawater, and found that the diatoms did not reproduce as well.

Co-author Shady Amin, a former UW postdoctoral researcher now on the faculty at New York University Abu Dhabi, added the bacteria common to all five samples back one at a time. One type, Sulfitobacter, sped up the growth dramatically when added back at a high enough concentration.

The authors showed that these bacteria exchange material with the diatoms while in turn producing auxin, a well-known hormone made by microbes living around the roots of land plants.

“The back-and-forth exchange of materials between these tiny creatures resembles an ongoing dialogue between two living organisms that culminates in the production of auxin,” Amin said. “It was so fascinating that we wondered if we could see this behavior elsewhere."


The black circles and triangles show the growth of the diatom Pseudo-nitzschia multiseries collected at Golden Gardens in Seattle and Penn Cove on Whidbey Island, respectively. White circles and triangles are those same populations grown with Sulfitobacter.V. Armbrust / UW

Next, researchers went to sea and adopted some high-tech tools. Having shown what happens in the lab, they collected other ocean samples and found the same growth hormone. Then they used new genetic techniques to detect the activity of marine microbes — famously difficult to raise in captivity — that would never survive the transition to the lab. The same interaction was taking place, especially along coasts, but between different organisms that cannot be transferred to the lab.

“We’re just at a place as a field where we recognize that there may be very specific interactions between marine microbes,” Armbrust said. “Don’t ask me how many comparable interactions are out there. I have no idea. I can only imagine that there’s lots. And we’ve grabbed one of them.”

She predicts that more such interactions will help to explain how ocean waters become or stay productive, or how the base of the marine food web might shift in a changing climate.

“A lot of the high-powered tools that look at the function of individual cells were developed in the medical world,” Armbrust said. “Now that we can apply them to the ocean, we are starting to pull the curtains back on how this hidden world works.”

Other co-authors from UW oceanography are graduate students Helena van Tol and Katherine Heal; associate professor Anitra Ingalls; and research scientists Rhonda Morales, Chris Berthiaume, Laura Carlson and Micaela Parker. Other co-authors are Laura Hmelo and Matthew Parsek from UW microbiology; undergraduate Bryan Djunaedi from UW computer science and engineering; and Mary Ann Moran at the University of Georgia.

The research was funded by the National Science Foundation and the Gordon and Betty Moore Foundation.

Journal Reference: Ginger Armbrust et al. Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria. Nature, May 2015 DOI: 10.1038/nature14488

Author: Leonard Ho
Location: Southern California

I'm a passionate aquarist of over 30 years, a coral reef lover, and the blog editor for Advanced Aquarist. While aquarium gadgets interest me, it's really livestock (especially fish), artistry of aquariums, and "method behind the madness" processes that captivate my attention.


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